Agrobacterium tumefaciens str. A6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. A6 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This microbe is classified as an aerobic organism, requiring oxygen for its metabolic processes. A. tumefaciens str. A6 exhibits a versatile habitat, being found in multiple environments, which may include soil and plant-associated niches. The ability of A. tumefaciens to inhabit diverse ecological settings highlights its potential role in various biogeochemical cycles. Its aerobic nature suggests it may participate in aerobic decomposition processes, contributing to nutrient cycling in its habitats. Moreover, A. tumefaciens is well-known for its interactions with plant systems, particularly through its capacity to transfer DNA to host plants, which influences plant cell behavior. This trait emphasizes the bacterium's importance not only in the context of microbial ecology but also in agricultural biotechnology. The ecological implications of A. tumefaciens str. A6 extend beyond its basic traits, as its adaptability to various environments may facilitate its use in bioremediation and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. A6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. A6

Accession NumberNZ_CP033027.1

Gene Summary

Adenine Count

586686 bp

Thymine Count

578925 bp

Guanine Count

826474 bp

Cytosine Count

840134 bp

Genome Length

2832219 bp

Protein-coding Genes

2634 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
endonuclease/exonuclease/phosphatase family proteinAtA6_RS05230Not Available-1050883 - 105168630028.6
aminomethyl-transferring glycine dehydrogenaseAtA6_RS05235Not Available-1051846 - 1054710104204.0
glycine cleavage system protein gcvhAtA6_RS05240Not Available-1054710 - 105507212816.9
glycine cleavage system aminomethyltransferase gcvtAtA6_RS05245Not Available-1055101 - 105624040565.7
duf3008 family proteinAtA6_RS05250Not Available-1056607 - 10567926476.83
hypothetical proteinAtA6_RS05255Not Available+1056966 - 105734613397.1
copper chaperone pcu(a)cAtA6_RS05260Not Available+1057435 - 105842434656.5
plastocyanin/azurin family copper-binding proteinAtA6_RS05265Not Available-1058487 - 105891515076.5
hypothetical proteinAtA6_RS05270Not Available-1059035 - 105932510637.5
fluoride efflux transporter crcbAtA6_RS05275Not Available+1059528 - 105990513008.4

Displaying genes 1101 – 1110 of 5569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites