Agrobacterium tumefaciens str. A6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. A6 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This microbe is classified as an aerobic organism, requiring oxygen for its metabolic processes. A. tumefaciens str. A6 exhibits a versatile habitat, being found in multiple environments, which may include soil and plant-associated niches. The ability of A. tumefaciens to inhabit diverse ecological settings highlights its potential role in various biogeochemical cycles. Its aerobic nature suggests it may participate in aerobic decomposition processes, contributing to nutrient cycling in its habitats. Moreover, A. tumefaciens is well-known for its interactions with plant systems, particularly through its capacity to transfer DNA to host plants, which influences plant cell behavior. This trait emphasizes the bacterium's importance not only in the context of microbial ecology but also in agricultural biotechnology. The ecological implications of A. tumefaciens str. A6 extend beyond its basic traits, as its adaptability to various environments may facilitate its use in bioremediation and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. A6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. A6

Accession NumberNZ_CP033027.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2634 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dmt family transporterAtA6_RS20235Not Available+1344106 - 134499332211.2
glutathione s-transferase family proteinAtA6_RS20240Not Available+1345099 - 134607936206.9
lysr family transcriptional regulatorAtA6_RS20245Not Available-1346084 - 134698633849.7
aldehyde dehydrogenase family proteinAtA6_RS20250Not Available+1347202 - 134873153832.4
aliphatic sulfonate abc transporter substrate-binding proteinAtA6_RS20255Not Available+1348989 - 134994233491.0
abc transporter permease subunitAtA6_RS20260Not Available+1349966 - 135074528173.3
abc transporter atp-binding proteinAtA6_RS20265Not Available+1350754 - 135158129938.1
trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenaseAtA6_RS20270Not Available-1351625 - 1355311131098.0
lrp/asnc ligand binding domain-containing proteinAtA6_RS20280Not Available+1355487 - 135595717612.4
rna polymerase sigma factorAtA6_RS20285Not Available-1356024 - 135659021038.0

Displaying genes 4901 – 4910 of 5569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites