Agrobacterium tumefaciens str. A6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. A6 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This microbe is classified as an aerobic organism, requiring oxygen for its metabolic processes. A. tumefaciens str. A6 exhibits a versatile habitat, being found in multiple environments, which may include soil and plant-associated niches. The ability of A. tumefaciens to inhabit diverse ecological settings highlights its potential role in various biogeochemical cycles. Its aerobic nature suggests it may participate in aerobic decomposition processes, contributing to nutrient cycling in its habitats. Moreover, A. tumefaciens is well-known for its interactions with plant systems, particularly through its capacity to transfer DNA to host plants, which influences plant cell behavior. This trait emphasizes the bacterium's importance not only in the context of microbial ecology but also in agricultural biotechnology. The ecological implications of A. tumefaciens str. A6 extend beyond its basic traits, as its adaptability to various environments may facilitate its use in bioremediation and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. A6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. A6

Accession NumberNZ_CP033027.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2634 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4170 domain-containing proteinAtA6_RS01660Not Available+341667 - 3419069130.94
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseAtA6_RS01665Not Available+342122 - 34344449118.2
had family hydrolaseAtA6_RS01670Not Available+343438 - 34417525526.3
tetraacyldisaccharide 4'-kinaseAtA6_RS01675Not Available+344340 - 34538637744.5
duf3892 domain-containing proteinAtA6_RS01680Not Available-345462 - 34574910543.5
duf2093 domain-containing proteinAtA6_RS01685Not Available-345872 - 3460937998.44
dna mismatch repair endonuclease mutlAtA6_RS01690Not Available-346244 - 34806465217.8
response regulatorAtA6_RS01695Not Available+348472 - 35009159291.3
putative bifunctional diguanylate cyclase/phosphodiesteraseAtA6_RS01700Not Available+350234 - 35158649832.4
smp-30/gluconolactonase/lre family proteinAtA6_RS01705Not Available-351681 - 35256831737.6

Displaying genes 411 – 420 of 5569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites