Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens str. A6
Accession NumberNZ_CP033027.1
Gene Summary
Adenine Count
586686 bp
Thymine Count
578925 bp
Guanine Count
826474 bp
Cytosine Count
840134 bp
Genome Length
2832219 bp
Protein-coding Genes
2634 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | AtA6_RS16495 | Not Available | - | 546976 - 549405 | 85635.3 |
| lysr family transcriptional regulator | AtA6_RS16505 | Not Available | + | 549733 - 550707 | 35721.9 |
| nadp-dependent malic enzyme | AtA6_RS16510 | Not Available | + | 550868 - 553156 | 82542.8 |
| transporter substrate-binding domain-containing protein | AtA6_RS16515 | Not Available | + | 553425 - 554264 | 29993.2 |
| amino acid abc transporter permease | AtA6_RS16520 | Not Available | + | 554467 - 555210 | 26947.5 |
| amino acid abc transporter permease | AtA6_RS16525 | Not Available | + | 555207 - 555989 | 28557.7 |
| amino acid abc transporter atp-binding protein | AtA6_RS16530 | Not Available | + | 556002 - 556802 | 28715.9 |
| mmge/prpd family protein | AtA6_RS16535 | Not Available | + | 556807 - 558153 | 46504.3 |
| llm class flavin-dependent oxidoreductase | AtA6_RS16540 | Not Available | + | 558172 - 559491 | 48672.9 |
| methyl-accepting chemotaxis protein | AtA6_RS16545 | Not Available | - | 559562 - 561298 | 63426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
