Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens str. A6
Accession NumberNZ_CP033027.1
Gene Summary
Adenine Count
586686 bp
Thymine Count
578925 bp
Guanine Count
826474 bp
Cytosine Count
840134 bp
Genome Length
2832219 bp
Protein-coding Genes
2634 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | AtA6_RS15945 | Not Available | + | 419219 - 419935 | 26596.6 |
| sialic acid trap transporter substrate-binding protein siap | AtA6_RS15950 | Not Available | + | 419997 - 420971 | 36072.2 |
| trap transporter small permease | AtA6_RS15955 | Not Available | + | 421033 - 421605 | 22137.0 |
| trap transporter large permease | AtA6_RS15960 | Not Available | + | 421610 - 423016 | 49958.0 |
| l-idonate 5-dehydrogenase | AtA6_RS15965 | Not Available | + | 423089 - 424135 | 36740.3 |
| mannonate dehydratase | AtA6_RS15970 | Not Available | + | 424152 - 425360 | 44783.0 |
| antibiotic resistance protein vanz | AtA6_RS15975 | Not Available | - | 425389 - 425742 | 12606.8 |
| aldehyde dehydrogenase (nadp(+)) | AtA6_RS15980 | Not Available | + | 425988 - 427499 | 53182.2 |
| trap transporter substrate-binding protein | AtA6_RS15985 | Not Available | - | 427557 - 428555 | 36153.3 |
| trap transporter large permease subunit | AtA6_RS15990 | Not Available | - | 428572 - 430404 | 62448.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
