Agrobacterium tumefaciens str. A6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. A6 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This microbe is classified as an aerobic organism, requiring oxygen for its metabolic processes. A. tumefaciens str. A6 exhibits a versatile habitat, being found in multiple environments, which may include soil and plant-associated niches. The ability of A. tumefaciens to inhabit diverse ecological settings highlights its potential role in various biogeochemical cycles. Its aerobic nature suggests it may participate in aerobic decomposition processes, contributing to nutrient cycling in its habitats. Moreover, A. tumefaciens is well-known for its interactions with plant systems, particularly through its capacity to transfer DNA to host plants, which influences plant cell behavior. This trait emphasizes the bacterium's importance not only in the context of microbial ecology but also in agricultural biotechnology. The ecological implications of A. tumefaciens str. A6 extend beyond its basic traits, as its adaptability to various environments may facilitate its use in bioremediation and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. A6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. A6

Accession NumberNZ_CP033027.1

Gene Summary

Adenine Count

586686 bp

Thymine Count

578925 bp

Guanine Count

826474 bp

Cytosine Count

840134 bp

Genome Length

2832219 bp

Protein-coding Genes

2634 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gatb/yqey domain-containing proteinAtA6_RS08995Not Available-1787187 - 178763616570.0
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitAtA6_RS09000Not Available+1787976 - 178918142941.9
mate family efflux transporterAtA6_RS09005Not Available-1789221 - 179061849582.4
methyl-accepting chemotaxis proteinAtA6_RS09010Not Available+1790948 - 179303874306.9
duf2938 domain-containing proteinAtA6_RS09015Not Available+1793239 - 179371817624.8
neutral zinc metallopeptidaseAtA6_RS09020Not Available-1793759 - 179468833346.9
duf2306 domain-containing proteinAtA6_RS09025Not Available-1794784 - 179527217911.7
lyttr family dna-binding domain-containing proteinAtA6_RS09030Not Available+1795321 - 179618731761.8
carbamoyl-phosphate synthase large subunitAtA6_RS09035Not Available+1796344 - 1799832125920.0
ggdef domain-containing proteinAtA6_RS09040Not Available-1799916 - 180105540204.8

Displaying genes 1771 – 1780 of 5569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites