Agrobacterium tumefaciens str. 186

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 186 is a rod-shaped, Gram-negative bacterium that thrives optimally at a temperature of 25.0°C. As an aerobe, this microbe requires oxygen for its metabolic processes, which is characteristic of its adaptability to various environmental conditions. A. tumefaciens is notably found in multiple habitats, indicating its ecological versatility and capacity to colonize diverse environments. This strain is part of a larger group of Agrobacterium species known for their role in plant interactions, particularly in the context of plant transformation. While the specific interactions of A. tumefaciens str. 186 with plant hosts are not detailed here, the genus is widely recognized for its ability to transfer genetic material to plants, facilitating the study of plant genetics and biotechnology applications. Given its broad habitat range and aerobic nature, A. tumefaciens str. 186 may serve as a model organism for understanding microbial ecology and interactions within various ecosystems. This adaptability underscores the potential for A. tumefaciens strains to contribute to soil health and nutrient cycling, which could be essential in agricultural settings. Thus, the ecological role of A. tumefaciens str. 186 may extend beyond plant transformation, highlighting its significance in promoting microbial diversity and interactions in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 186
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 186

Accession NumberNZ_CP042275.2

Gene Summary

Adenine Count

447018 bp

Thymine Count

447468 bp

Guanine Count

659232 bp

Cytosine Count

658668 bp

Genome Length

2212386 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5-(carboxyamino)imidazole ribonucleotide synthaseCG010_RS18325Not Available+870609 - 87168538226.7
type b 50s ribosomal protein l36CG010_RS18330Not Available+871832 - 8719574960.26
tetratricopeptide repeat proteinCG010_RS18335Not Available+872052 - 87267222429.5
duf2312 domain-containing proteinCG010_RS18340Not Available-872741 - 8729989694.6
duf1244 domain-containing proteinCG010_RS18345Not Available-873146 - 87345111957.9
n-formylglutamate amidohydrolaseCG010_RS18350Not Available-873467 - 87425529453.2
duf1036 domain-containing proteinCG010_RS18355Not Available+874451 - 87493317856.9
pyruvate kinaseCG010_RS18360Not Available+874933 - 87637251366.2
duf882 domain-containing proteinCG010_RS18365Not Available-876455 - 87835966672.1
sigma-54-dependent transcriptional regulatorCG010_RS18370Not Available-878535 - 88008256096.4

Displaying genes 801 – 810 of 1996 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites