Agrobacterium tumefaciens str. 186

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 186 is a rod-shaped, Gram-negative bacterium that thrives optimally at a temperature of 25.0°C. As an aerobe, this microbe requires oxygen for its metabolic processes, which is characteristic of its adaptability to various environmental conditions. A. tumefaciens is notably found in multiple habitats, indicating its ecological versatility and capacity to colonize diverse environments. This strain is part of a larger group of Agrobacterium species known for their role in plant interactions, particularly in the context of plant transformation. While the specific interactions of A. tumefaciens str. 186 with plant hosts are not detailed here, the genus is widely recognized for its ability to transfer genetic material to plants, facilitating the study of plant genetics and biotechnology applications. Given its broad habitat range and aerobic nature, A. tumefaciens str. 186 may serve as a model organism for understanding microbial ecology and interactions within various ecosystems. This adaptability underscores the potential for A. tumefaciens strains to contribute to soil health and nutrient cycling, which could be essential in agricultural settings. Thus, the ecological role of A. tumefaciens str. 186 may extend beyond plant transformation, highlighting its significance in promoting microbial diversity and interactions in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 186
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 186

Accession NumberNZ_CP042275.2

Gene Summary

Adenine Count

447018 bp

Thymine Count

447468 bp

Guanine Count

659232 bp

Cytosine Count

658668 bp

Genome Length

2212386 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyridoxamine 5'-phosphate oxidase family proteinCG010_RS18180Not Available+842552 - 84305518818.1
mbl fold metallo-hydrolaseCG010_RS18185Not Available-843094 - 84393630641.2
tigr00282 family metallophosphoesteraseCG010_RS18190Not Available-844051 - 84487529618.2
5-formyltetrahydrofolate cyclo-ligaseCG010_RS18195Not Available-844948 - 84556522173.7
hemolysin family proteinCG010_RS18200Not Available-845565 - 84682745328.6
Ncrna_class:otherNot AvailableNot Available+847057 - 847215Not Available
cell division protein zapaCG010_RS18210Not Available-847295 - 84767213794.7
duf4164 domain-containing proteinCG010_RS18215Not Available-847683 - 84795510414.3
transketolaseCG010_RS18220Not Available+848281 - 85026371520.1
type i glyceraldehyde-3-phosphate dehydrogenaseCG010_RS18225Not Available+850327 - 85133736070.4

Displaying genes 771 – 780 of 1996 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites