Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens str. 1D1460
Accession NumberNZ_CP032926.1
Gene Summary
Adenine Count
583266 bp
Thymine Count
575562 bp
Guanine Count
847147 bp
Cytosine Count
861474 bp
Genome Length
2867449 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system-associated acyl-coa thioesterase | At1D1460_RS18385 | Not Available | - | 821538 - 821978 | 16505.1 |
| nudix hydrolase | At1D1460_RS18390 | Not Available | - | 821975 - 822511 | 20668.8 |
| nudix hydrolase | At1D1460_RS18395 | Not Available | - | 822508 - 823032 | 20556.4 |
| dinb family protein | At1D1460_RS18400 | Not Available | - | 823029 - 823610 | 21865.0 |
| duf2945 domain-containing protein | At1D1460_RS18405 | Not Available | - | 823647 - 823865 | 8140.54 |
| holliday junction branch migration dna helicase ruvb | At1D1460_RS18410 | Not Available | - | 823917 - 824957 | 38225.4 |
| holliday junction branch migration protein ruva | At1D1460_RS18415 | Not Available | - | 825084 - 825701 | 21332.8 |
| crossover junction endodeoxyribonuclease ruvc | At1D1460_RS18420 | Not Available | - | 825734 - 826246 | 18094.1 |
| methyl-accepting chemotaxis protein | At1D1460_RS18425 | Not Available | + | 826494 - 828803 | 82260.5 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS18430 | Not Available | + | 828948 - 829949 | 36657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
