Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens str. 1D1460
Accession NumberNZ_CP032926.1
Gene Summary
Adenine Count
583266 bp
Thymine Count
575562 bp
Guanine Count
847147 bp
Cytosine Count
861474 bp
Genome Length
2867449 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | At1D1460_RS22440 | Not Available | - | 1689151 - 1689819 | 24081.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | At1D1460_RS22445 | Not Available | - | 1690184 - 1691245 | 37337.7 |
| protocatechuate 3,4-dioxygenase subunit alpha | At1D1460_RS22450 | Not Available | - | 1691258 - 1691878 | 22921.1 |
| protocatechuate 3,4-dioxygenase subunit beta | At1D1460_RS22455 | Not Available | - | 1691881 - 1692621 | 27764.3 |
| 4-carboxymuconolactone decarboxylase | At1D1460_RS22460 | Not Available | - | 1692618 - 1693037 | 15221.0 |
| 3-oxoadipate enol-lactonase | At1D1460_RS22465 | Not Available | - | 1693041 - 1693838 | 28542.2 |
| pca operon transcription factor pcaq | At1D1460_RS22470 | Not Available | + | 1693933 - 1694868 | 33501.9 |
| 4-hydroxybenzoate 3-monooxygenase | At1D1460_RS22475 | Not Available | - | 1694991 - 1696163 | 43797.9 |
| helix-turn-helix domain-containing protein | At1D1460_RS22480 | Not Available | + | 1696281 - 1697204 | 34289.5 |
| iclr family transcriptional regulator | At1D1460_RS22485 | Not Available | - | 1697174 - 1697935 | 27391.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
