Agrobacterium tumefaciens str. 1D1460

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 1D1460 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and is classified as an aerobic organism. This strain is part of a diverse group of bacteria known for their ability to inhabit multiple environments, highlighting their ecological versatility. The rod shape and Gram-negative staining indicate a complex cell wall structure, which may contribute to its adaptability in various habitats. The preference for aerobic conditions suggests that A. tumefaciens str. 1D1460 relies on oxygen for its metabolic processes, a trait that could influence its distribution in environments with varying oxygen availability. The ecological significance of A. tumefaciens str. 1D1460 may extend beyond its basic biological traits, as members of this species are commonly associated with plant interactions, where they can play a role in nutrient cycling and plant-microbe interactions. The ability to thrive in diverse habitats suggests that this strain may contribute to the microbial community dynamics in both soil and rhizosphere environments, potentially influencing plant health and soil fertility. Further studies could elucidate the specific roles and interactions of A. tumefaciens str. 1D1460 within its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 1D1460
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 1D1460

Accession NumberNZ_CP032926.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2726 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf952 domain-containing proteinAt1D1460_RS00665Not Available+134967 - 13532012706.2
quinone-dependent dihydroorotate dehydrogenaseAt1D1460_RS00670Not Available+135320 - 13641138798.9
cap domain-containing proteinAt1D1460_RS00675Not Available-136585 - 13708217435.2
duf6460 domain-containing proteinAt1D1460_RS00680Not Available-137084 - 1373509722.38
class i sam-dependent dna methyltransferaseAt1D1460_RS00685Not Available+137520 - 13846134019.4
yitt family proteinAt1D1460_RS00690Not Available+138596 - 13920722158.7
yitt family proteinAt1D1460_RS00695Not Available+139280 - 13992122992.5
carboxymuconolactone decarboxylase family proteinAt1D1460_RS00700Not Available-139948 - 14040917060.4
rrf2 family transcriptional regulatorAt1D1460_RS00705Not Available-140509 - 14101217387.1
ligase-associated dna damage response dexh box helicaseAt1D1460_RS00710Not Available+141063 - 14365496006.0

Displaying genes 211 – 220 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites