Agrobacterium tumefaciens str. 1D1460

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 1D1460 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and is classified as an aerobic organism. This strain is part of a diverse group of bacteria known for their ability to inhabit multiple environments, highlighting their ecological versatility. The rod shape and Gram-negative staining indicate a complex cell wall structure, which may contribute to its adaptability in various habitats. The preference for aerobic conditions suggests that A. tumefaciens str. 1D1460 relies on oxygen for its metabolic processes, a trait that could influence its distribution in environments with varying oxygen availability. The ecological significance of A. tumefaciens str. 1D1460 may extend beyond its basic biological traits, as members of this species are commonly associated with plant interactions, where they can play a role in nutrient cycling and plant-microbe interactions. The ability to thrive in diverse habitats suggests that this strain may contribute to the microbial community dynamics in both soil and rhizosphere environments, potentially influencing plant health and soil fertility. Further studies could elucidate the specific roles and interactions of A. tumefaciens str. 1D1460 within its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 1D1460
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 1D1460

Accession NumberNZ_CP032926.1

Gene Summary

Adenine Count

583266 bp

Thymine Count

575562 bp

Guanine Count

847147 bp

Cytosine Count

861474 bp

Genome Length

2867449 bp

Protein-coding Genes

2726 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
carboxymuconolactone decarboxylase family proteinAt1D1460_RS08885Not Available+1695161 - 169557114807.8
atp-dependent helicaseAt1D1460_RS08890Not Available+1695672 - 169814692584.6
glycosyltransferase family 25 proteinAt1D1460_RS08895Not Available+1698251 - 169906330190.7
dmt family transporterAt1D1460_RS08900Not Available+1699335 - 169981716517.6
dmt family transporterAt1D1460_RS08905Not Available+1699814 - 170023914729.6
duf2778 domain-containing proteinAt1D1460_RS08910Not Available-1700303 - 170157444636.3
bifunctional nicotinamidase/pyrazinamidaseAt1D1460_RS08915Not Available+1702031 - 170265722683.7
duf2164 domain-containing proteinAt1D1460_RS08925Not Available-1702809 - 17030458888.57
azlc family abc transporter permeaseAt1D1460_RS08930Not Available+1703225 - 170394425458.1
azld family proteinAt1D1460_RS08935Not Available+1703941 - 170425511115.3

Displaying genes 1721 – 1730 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites