Agrobacterium tumefaciens str. 1D1460

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 1D1460 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and is classified as an aerobic organism. This strain is part of a diverse group of bacteria known for their ability to inhabit multiple environments, highlighting their ecological versatility. The rod shape and Gram-negative staining indicate a complex cell wall structure, which may contribute to its adaptability in various habitats. The preference for aerobic conditions suggests that A. tumefaciens str. 1D1460 relies on oxygen for its metabolic processes, a trait that could influence its distribution in environments with varying oxygen availability. The ecological significance of A. tumefaciens str. 1D1460 may extend beyond its basic biological traits, as members of this species are commonly associated with plant interactions, where they can play a role in nutrient cycling and plant-microbe interactions. The ability to thrive in diverse habitats suggests that this strain may contribute to the microbial community dynamics in both soil and rhizosphere environments, potentially influencing plant health and soil fertility. Further studies could elucidate the specific roles and interactions of A. tumefaciens str. 1D1460 within its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 1D1460
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 1D1460

Accession NumberNZ_CP032926.1

Gene Summary

Adenine Count

583266 bp

Thymine Count

575562 bp

Guanine Count

847147 bp

Cytosine Count

861474 bp

Genome Length

2867449 bp

Protein-coding Genes

2726 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneAt1D1460_RS05875Not Available-1147481 - 11476335478.62
cytochrome-c oxidase, cbb3-type subunit iiAt1D1460_RS05880Not Available-1147647 - 114837827116.3
cytochrome-c oxidase, cbb3-type subunit iAt1D1460_RS05885Not Available-1148389 - 115003561893.1
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseAt1D1460_RS05890Not Available-1150275 - 115079619038.8
duf599 domain-containing proteinAt1D1460_RS05900Not Available+1151298 - 115199026186.2
heparan-alpha-glucosaminide n-acetyltransferaseAt1D1460_RS05905Not Available+1152084 - 115304935430.1
merr family transcriptional regulatorAt1D1460_RS05910Not Available-1153205 - 115359115021.2
magnesium transporterAt1D1460_RS05915Not Available-1153663 - 115509051713.8
fdhf/ydep family oxidoreductaseAt1D1460_RS05920Not Available+1155484 - 115778483998.2
hypothetical proteinAt1D1460_RS05925Not Available+1157784 - 115808610788.9

Displaying genes 1201 – 1210 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites