Agrobacterium tumefaciens str. 1D1460

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 1D1460 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and is classified as an aerobic organism. This strain is part of a diverse group of bacteria known for their ability to inhabit multiple environments, highlighting their ecological versatility. The rod shape and Gram-negative staining indicate a complex cell wall structure, which may contribute to its adaptability in various habitats. The preference for aerobic conditions suggests that A. tumefaciens str. 1D1460 relies on oxygen for its metabolic processes, a trait that could influence its distribution in environments with varying oxygen availability. The ecological significance of A. tumefaciens str. 1D1460 may extend beyond its basic biological traits, as members of this species are commonly associated with plant interactions, where they can play a role in nutrient cycling and plant-microbe interactions. The ability to thrive in diverse habitats suggests that this strain may contribute to the microbial community dynamics in both soil and rhizosphere environments, potentially influencing plant health and soil fertility. Further studies could elucidate the specific roles and interactions of A. tumefaciens str. 1D1460 within its ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 1D1460
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. 1D1460

Accession NumberNZ_CP032926.1

Gene Summary

Adenine Count

583266 bp

Thymine Count

575562 bp

Guanine Count

847147 bp

Cytosine Count

861474 bp

Genome Length

2867449 bp

Protein-coding Genes

2726 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna dihydrouridine(20/20a) synthase dusaAt1D1460_RS05775Not Available-1127306 - 112831636930.6
fumarylacetoacetate hydrolase family proteinAt1D1460_RS05780Not Available+1128454 - 112914324573.6
gamma carbonic anhydrase family proteinAt1D1460_RS05785Not Available+1129179 - 112971218712.3
zinc uptake transcriptional repressor zurAt1D1460_RS05790Not Available-1129749 - 113016215468.5
zinc abc transporter permease subunit znubAt1D1460_RS05795Not Available-1130159 - 113097728581.2
zinc abc transporter atp-binding protein znucAt1D1460_RS05800Not Available-1130970 - 113190233719.9
zinc abc transporter substrate-binding protein znuaAt1D1460_RS05805Not Available+1132007 - 113299935286.6
laci family transcriptional regulatorAt1D1460_RS05810Not Available-1133182 - 113423438454.2
beta-mannosidaseAt1D1460_RS05815Not Available+1134723 - 113718892865.4
l-glyceraldehyde 3-phosphate reductaseAt1D1460_RS05820Not Available+1137314 - 113834538093.3

Displaying genes 1181 – 1190 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites