Pseudomonas syringae

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae is a Gram-negative, rod-shaped bacterium that thrives in a wide range of temperatures, falling under the category of mesophilic organisms. It is a chemoheterotroph, meaning it derives its energy from the breakdown of organic compounds rather than through photosynthesis. P. syringae produces energy through a respiratory process, utilizing oxygen as its primary electron acceptor. When stained with Gram stain, P. syringae exhibits a characteristic Gram-negative reaction, with a thin peptidoglycan layer and an outer membrane composed of lipopolysaccharides and phospholipids. The bacterium's rod shape ranges from slender to stout, with some strains displaying a characteristic "S" shape. Despite its ability to grow on a variety of surfaces, P. syringae is typically found inhabiting plant surfaces, such as leaves, stems, and flowers. Its ability to colonize plant material allows it to participate in vital ecological processes, including decomposition and nutrient cycling. P. syringae is an obligate aerobe, requiring oxygen to survive and grow. It thrives in environments with moderate to high levels of oxygen and can be found in a range of ecosystems, from soil to aquatic environments. The bacterium's ability to utilize oxygen as its primary electron acceptor allows it to efficiently generate energy through respiration. One of the most notable aspects of Pseudomonas syringae is its ability to produce a range of secondary metabolites, including antibiotics, antifungals, and plant growth regulators. These compounds play a crucial role in the bacterium's survival, allowing it to outcompete other microorganisms for resources and space. Furthermore, P. syringae has been shown to be a key component of plant-microbe interactions, influencing plant growth and development through the production of signaling molecules. In addition to its ecological significance, P. syringae has also been implicated in several human diseases, including pneumonia and urinary tract infections. Its ability to produce virulence factors, such as lipopolysaccharides and exotoxins, allows it to evade the host immune system and cause disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae

Accession NumberNZ_LT963409.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5278 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
recombinase family proteinC6H39_RS30485Not Available+574 - 117021616.0
tn3-like element ispsy30 family transposaseC6H39_RS30490Not Available+1160 - 4186115370.0
hypothetical proteinC6H39_RS30495Not Available-4209 - 452912203.7
type ii toxin-antitoxin system hicb family antitoxinC6H39_RS30500Not Available-4695 - 511715617.0
type ii toxin-antitoxin system hica family toxinC6H39_RS30505Not Available-5149 - 53316837.34
hypothetical proteinC6H39_RS30510Not Available+5624 - 590510243.0
is91 family transposaseC6H39_RS30515Not Available+5907 - 711245887.2
hypothetical proteinC6H39_RS30525Not Available+7386 - 766710268.0
is91 family transposaseC6H39_RS30530Not Available+7669 - 887746020.3
mate family efflux transporterC6H39_RS30540Not Available+9449 - 1082548425.9

Displaying genes 1 – 10 of 5978 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0031900LPA(16:1(9Z)/0:0)C19H37O7PChemical structure of LPA(16:1(9Z)/0:0)NULL
Average408.472Da
Monoisotopic408.227690529Da
BASm0032019PA(12:0/14:0)C29H57O8PChemical structure of PA(12:0/14:0)NULL
Average564.7318Da
Monoisotopic564.379105312Da
BASm0032039PA(12:0/18:1(11Z))C33H63O8PChemical structure of PA(12:0/18:1(11Z))NULL
Average618.833Da
Monoisotopic618.426055987Da
BASm0032069PA(14:0/16:0)C33H65O8PChemical structure of PA(14:0/16:0)NULL
Average620.849Da
Monoisotopic620.441706051Da
BASm0032089PA(14:0/18:1(11Z))C35H67O8PChemical structure of PA(14:0/18:1(11Z))NULL
Average646.887Da
Monoisotopic646.457356115Da
BASm0033987PS(12:0/14:0)C32H62NO10PChemical structure of PS(12:0/14:0)NULL
Average651.819Da
Monoisotopic651.411134198Da
BASm0033995PS(12:0/18:1(11Z))C36H68NO10PChemical structure of PS(12:0/18:1(11Z))NULL
Average705.911Da
Monoisotopic705.458084392Da
BASm0034613Palmitoleyl-CoAC37H64N7O17P3SChemical structure of Palmitoleyl-CoA18198-76-0
Average1003.93Da
Monoisotopic1003.329225797Da

Displaying 81–88 of 88 metabolites