Pseudomonas syringae

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae is a Gram-negative, rod-shaped bacterium that thrives in a wide range of temperatures, falling under the category of mesophilic organisms. It is a chemoheterotroph, meaning it derives its energy from the breakdown of organic compounds rather than through photosynthesis. P. syringae produces energy through a respiratory process, utilizing oxygen as its primary electron acceptor. When stained with Gram stain, P. syringae exhibits a characteristic Gram-negative reaction, with a thin peptidoglycan layer and an outer membrane composed of lipopolysaccharides and phospholipids. The bacterium's rod shape ranges from slender to stout, with some strains displaying a characteristic "S" shape. Despite its ability to grow on a variety of surfaces, P. syringae is typically found inhabiting plant surfaces, such as leaves, stems, and flowers. Its ability to colonize plant material allows it to participate in vital ecological processes, including decomposition and nutrient cycling. P. syringae is an obligate aerobe, requiring oxygen to survive and grow. It thrives in environments with moderate to high levels of oxygen and can be found in a range of ecosystems, from soil to aquatic environments. The bacterium's ability to utilize oxygen as its primary electron acceptor allows it to efficiently generate energy through respiration. One of the most notable aspects of Pseudomonas syringae is its ability to produce a range of secondary metabolites, including antibiotics, antifungals, and plant growth regulators. These compounds play a crucial role in the bacterium's survival, allowing it to outcompete other microorganisms for resources and space. Furthermore, P. syringae has been shown to be a key component of plant-microbe interactions, influencing plant growth and development through the production of signaling molecules. In addition to its ecological significance, P. syringae has also been implicated in several human diseases, including pneumonia and urinary tract infections. Its ability to produce virulence factors, such as lipopolysaccharides and exotoxins, allows it to evade the host immune system and cause disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae

Accession NumberNZ_LT963409.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5278 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
recombinase family proteinC6H39_RS30485Not Available+574 - 117021616.0
tn3-like element ispsy30 family transposaseC6H39_RS30490Not Available+1160 - 4186115370.0
hypothetical proteinC6H39_RS30495Not Available-4209 - 452912203.7
type ii toxin-antitoxin system hicb family antitoxinC6H39_RS30500Not Available-4695 - 511715617.0
type ii toxin-antitoxin system hica family toxinC6H39_RS30505Not Available-5149 - 53316837.34
hypothetical proteinC6H39_RS30510Not Available+5624 - 590510243.0
is91 family transposaseC6H39_RS30515Not Available+5907 - 711245887.2
hypothetical proteinC6H39_RS30525Not Available+7386 - 766710268.0
is91 family transposaseC6H39_RS30530Not Available+7669 - 887746020.3
mate family efflux transporterC6H39_RS30540Not Available+9449 - 1082548425.9

Displaying genes 1 – 10 of 5978 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm00188881-hexadecanoyl-sn-glycerol 3-phosphateC19H39O7PChemical structure of 1-hexadecanoyl-sn-glycerol 3-phosphateNULL
Average410.4825Da
Monoisotopic410.243340114Da
BASm00188942-Acyl-sn-glycero-3-phosphoethanolamine (N-C12:0)C17H36NO7PNot availableNULL
Average397.449Da
Monoisotopic397.222939501Da
BASm00188952-Acyl-sn-glycero-3-phosphoethanolamine (N-C14:0)C19H40NO7PNot availableNULL
Average425.503Da
Monoisotopic425.25423963Da
BASm00188972-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)C21H44NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)NULL
Average453.5503Da
Monoisotopic453.285539279Da
BASm00188992-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)C23H48NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)NULL
Average481.6035Da
Monoisotopic481.316839407Da
BASm00189012-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)C20H40O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)NULL
Average455.5Da
Monoisotopic455.24099439Da
BASm00189022-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)C20H38O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)NULL
Average453.4841Da
Monoisotopic453.225344326Da
BASm00189032-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)C22H44O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)NULL
Average483.5531Da
Monoisotopic483.272294518Da
BASm00189042-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)C22H42O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)NULL
Average481.5372Da
Monoisotopic481.256644454Da
BASm00189052-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)C24H48O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)NULL
Average511.6063Da
Monoisotopic511.303594646Da

Displaying 41–50 of 88 metabolites