Pseudomonas syringae

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae is a Gram-negative, rod-shaped bacterium that thrives in a wide range of temperatures, falling under the category of mesophilic organisms. It is a chemoheterotroph, meaning it derives its energy from the breakdown of organic compounds rather than through photosynthesis. P. syringae produces energy through a respiratory process, utilizing oxygen as its primary electron acceptor. When stained with Gram stain, P. syringae exhibits a characteristic Gram-negative reaction, with a thin peptidoglycan layer and an outer membrane composed of lipopolysaccharides and phospholipids. The bacterium's rod shape ranges from slender to stout, with some strains displaying a characteristic "S" shape. Despite its ability to grow on a variety of surfaces, P. syringae is typically found inhabiting plant surfaces, such as leaves, stems, and flowers. Its ability to colonize plant material allows it to participate in vital ecological processes, including decomposition and nutrient cycling. P. syringae is an obligate aerobe, requiring oxygen to survive and grow. It thrives in environments with moderate to high levels of oxygen and can be found in a range of ecosystems, from soil to aquatic environments. The bacterium's ability to utilize oxygen as its primary electron acceptor allows it to efficiently generate energy through respiration. One of the most notable aspects of Pseudomonas syringae is its ability to produce a range of secondary metabolites, including antibiotics, antifungals, and plant growth regulators. These compounds play a crucial role in the bacterium's survival, allowing it to outcompete other microorganisms for resources and space. Furthermore, P. syringae has been shown to be a key component of plant-microbe interactions, influencing plant growth and development through the production of signaling molecules. In addition to its ecological significance, P. syringae has also been implicated in several human diseases, including pneumonia and urinary tract infections. Its ability to produce virulence factors, such as lipopolysaccharides and exotoxins, allows it to evade the host immune system and cause disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae

Accession NumberNZ_LT963409.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5278 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
p-type conjugative transfer protein virb9DTQ61_RS29325Not Available-38763 - 3957229172.6
virb8 family proteinDTQ61_RS29330Not Available-39562 - 4035029643.0
conjugal transfer proteinDTQ61_RS29335Not Available-40387 - 406599218.05
type iv secretion system proteinDTQ61_RS29340Not Available-40733 - 4166533352.7
hypothetical proteinDTQ61_RS29345Not Available-41676 - 4202913070.8
p-type dna transfer protein virb5DTQ61_RS29350Not Available-42062 - 4274825489.5
virb4 family type iv secretion system proteinDTQ61_RS29355Not Available-42745 - 4524394038.3
virb3 family type iv secretion system proteinDTQ61_RS29360Not Available-45146 - 4563418173.3
conjugal transfer proteinDTQ61_RS29365Not Available-45647 - 4598211682.4
lytic transglycosylase domain-containing proteinDTQ61_RS29370Not Available-45982 - 4668924787.4

Displaying genes 251 – 260 of 5978 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites