Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. JQ581
Accession NumberNZ_CP050951.1
Gene Summary
Adenine Count
1267007 bp
Thymine Count
1269693 bp
Guanine Count
2061841 bp
Cytosine Count
2058154 bp
Genome Length
6656695 bp
Protein-coding Genes
5861 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hica family toxin | A3L25_RS26240 | Not Available | - | 5767598 - 5767825 | 8250.89 |
| cupin domain-containing protein | A3L25_RS26245 | Not Available | + | 5768133 - 5768477 | 12936.5 |
| 3-hydroxyisobutyrate dehydrogenase | A3L25_RS26250 | Not Available | - | 5768687 - 5769574 | 30266.6 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | A3L25_RS26255 | Not Available | - | 5769584 - 5771110 | 54282.3 |
| lysr family transcriptional regulator | A3L25_RS26260 | Not Available | + | 5771243 - 5772193 | 35333.6 |
| ompa family protein | A3L25_RS26265 | Not Available | - | 5772336 - 5772827 | 17315.7 |
| diguanylate cyclase domain-containing protein | A3L25_RS26270 | Not Available | - | 5772832 - 5774103 | 46297.5 |
| yfir family protein | A3L25_RS26275 | Not Available | - | 5774100 - 5774666 | 20417.6 |
| exodeoxyribonuclease v subunit alpha | A3L25_RS26280 | Not Available | - | 5774865 - 5776940 | 75586.9 |
| exodeoxyribonuclease v subunit beta | A3L25_RS26285 | Not Available | - | 5776937 - 5780611 | 137375.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



