Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. JQ581
Accession NumberNZ_CP050951.1
Gene Summary
Adenine Count
1267007 bp
Thymine Count
1269693 bp
Guanine Count
2061841 bp
Cytosine Count
2058154 bp
Genome Length
6656695 bp
Protein-coding Genes
5861 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | A3L25_RS07010 | Not Available | + | 1537087 - 1539852 | 101788.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | A3L25_RS07015 | Not Available | + | 1540120 - 1541205 | 39886.3 |
| prephenate dehydratase | A3L25_RS07020 | Not Available | + | 1541205 - 1542299 | 40421.6 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | A3L25_RS07025 | Not Available | + | 1542469 - 1544721 | 79551.2 |
| (d)cmp kinase | A3L25_RS07030 | Not Available | + | 1544718 - 1545404 | 24662.6 |
| 30s ribosomal protein s1 | A3L25_RS07035 | Not Available | + | 1545529 - 1547205 | 61559.2 |
| rep-associated tyrosine transposase | A3L25_RS07040 | Not Available | - | 1547263 - 1547718 | 17876.7 |
| integration host factor subunit beta | A3L25_RS07045 | Not Available | + | 1548111 - 1548407 | 11028.2 |
| lipopolysaccharide assembly protein lapa domain-containing protein | A3L25_RS07050 | Not Available | + | 1548427 - 1548690 | 9210.75 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | A3L25_RS07055 | Not Available | + | 1548794 - 1550224 | 51351.7 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



