Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. JQ581
Accession NumberNZ_CP050951.1
Gene Summary
Adenine Count
1267007 bp
Thymine Count
1269693 bp
Guanine Count
2061841 bp
Cytosine Count
2058154 bp
Genome Length
6656695 bp
Protein-coding Genes
5861 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | A3L25_RS06260 | Not Available | + | 1384819 - 1385292 | 16859.4 |
| trna pseudouridine(13) synthase trud | A3L25_RS06265 | Not Available | + | 1385289 - 1386347 | 38499.8 |
| 5'/3'-nucleotidase sure | A3L25_RS06270 | Not Available | + | 1386335 - 1387084 | 26300.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | A3L25_RS06275 | Not Available | + | 1387120 - 1387758 | 23500.7 |
| peptidoglycan dd-metalloendopeptidase family protein | A3L25_RS06280 | Not Available | + | 1387998 - 1388855 | 29985.7 |
| rna polymerase sigma factor rpos | A3L25_RS06285 | Not Available | + | 1388964 - 1389971 | 38191.7 |
| ferredoxin fdxa | A3L25_RS06290 | Not Available | - | 1390601 - 1390924 | 12036.1 |
| dna mismatch repair protein muts | A3L25_RS06295 | Not Available | - | 1391065 - 1393638 | 95176.7 |
| hypothetical protein | A3L25_RS06300 | Not Available | + | 1393942 - 1394595 | 25518.6 |
| hypothetical protein | A3L25_RS06305 | Not Available | + | 1394597 - 1394746 | 5965.45 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



