Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. JQ581
Accession NumberNZ_CP050951.1
Gene Summary
Adenine Count
1267007 bp
Thymine Count
1269693 bp
Guanine Count
2061841 bp
Cytosine Count
2058154 bp
Genome Length
6656695 bp
Protein-coding Genes
5861 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A3L25_RS06160 | Not Available | + | 1360272 - 1361462 | 42369.2 |
| rip metalloprotease rsep | A3L25_RS06165 | Not Available | + | 1361533 - 1362885 | 47760.6 |
| outer membrane protein assembly factor bama | A3L25_RS06170 | Not Available | + | 1362959 - 1365322 | 86817.0 |
| omph family outer membrane protein | A3L25_RS06175 | Not Available | + | 1365367 - 1365870 | 18794.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | A3L25_RS06180 | Not Available | + | 1365872 - 1366927 | 36477.8 |
| 3-hydroxyacyl-acp dehydratase fabz | A3L25_RS06185 | Not Available | + | 1367042 - 1367482 | 16583.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | A3L25_RS06190 | Not Available | + | 1367479 - 1368255 | 28159.8 |
| lipid-a-disaccharide synthase | A3L25_RS06195 | Not Available | + | 1368257 - 1369384 | 41173.7 |
| ribonuclease hii | A3L25_RS06200 | Not Available | + | 1369386 - 1370009 | 22200.2 |
| dna polymerase iii subunit alpha | A3L25_RS06205 | Not Available | + | 1370187 - 1373711 | 130815.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



