Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. JQ581
Accession NumberNZ_CP050951.1
Gene Summary
Adenine Count
1267007 bp
Thymine Count
1269693 bp
Guanine Count
2061841 bp
Cytosine Count
2058154 bp
Genome Length
6656695 bp
Protein-coding Genes
5861 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A3L25_RS05660 | Not Available | + | 1260380 - 1260805 | 15208.7 |
| type ii secretion system secretin gspd | A3L25_RS05665 | Not Available | + | 1260809 - 1262575 | 62641.7 |
| gspe/pule family protein | A3L25_RS05670 | Not Available | + | 1262575 - 1264023 | 52344.4 |
| type ii secretion system inner membrane protein gspf | A3L25_RS05675 | Not Available | + | 1264027 - 1265229 | 43517.1 |
| type ii secretion system major pseudopilin gspg | A3L25_RS05680 | Not Available | + | 1265247 - 1265681 | 16137.5 |
| type ii secretion system minor pseudopilin gsph | A3L25_RS05685 | Not Available | + | 1265684 - 1266121 | 15867.0 |
| type ii secretion system protein gspi | A3L25_RS05690 | Not Available | + | 1266118 - 1266486 | 14063.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | A3L25_RS05695 | Not Available | + | 1266644 - 1267234 | 22453.3 |
| type ii secretion system protein gspl | A3L25_RS05700 | Not Available | + | 1267231 - 1268307 | 40189.2 |
| type ii secretion system protein gspm | A3L25_RS05705 | Not Available | + | 1268304 - 1268690 | 14542.6 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



