Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. DPA1
Accession NumberNNBI00000000.1
Gene Summary
Adenine Count
1216865 bp
Thymine Count
1193652 bp
Guanine Count
1906742 bp
Cytosine Count
1950079 bp
Genome Length
6393883 bp
Protein-coding Genes
5630 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | CBL13_05472 | Not Available | - | 6026159 - 6026617 | 17760.3 |
| ethanolamine ammonia-lyase light chain | CBL13_05473 | Not Available | - | 6026725 - 6027543 | 29634.2 |
| ethanolamine ammonia-lyase heavy chain | CBL13_05474 | Not Available | - | 6027552 - 6028946 | 49927.9 |
| putative amino acid permease yhdg | CBL13_05475 | Not Available | - | 6028993 - 6030441 | 50803.9 |
| aldehyde dehydrogenase b | CBL13_05476 | Not Available | - | 6030669 - 6032189 | 55271.4 |
| acetoin catabolism regulatory protein | CBL13_05477 | Not Available | + | 6032444 - 6034459 | 73809.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | CBL13_05478 | Not Available | + | 6034526 - 6035875 | 48254.8 |
| putative aromatic acid decarboxylase | CBL13_05479 | Not Available | + | 6035872 - 6036501 | 22654.5 |
| hypothetical protein | CBL13_05480 | Not Available | + | 6036498 - 6036785 | 9727.09 |
| hypothetical protein | CBL13_05481 | Not Available | - | 6036892 - 6037536 | 23712.9 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



