Pseudomonas putida str. DPA1

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DPA1 is a Gram-negative, rod-shaped bacterium that exists primarily as single cells and is characterized by its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. As a heterotroph, P. putida DPA1 utilizes organic compounds as its energy source, making it well-suited for nutrient-rich habitats such as soil and wastewater. This strain does not undergo sporulation, which may indicate a reliance on stable environmental conditions for survival and growth. The ecological role of Pseudomonas putida DPA1 in soil and wastewater environments is significant, as it contributes to the degradation of organic pollutants, thereby aiding in bioremediation processes. Its metabolic versatility allows it to adapt to varying nutrient availability and oxygen levels, potentially facilitating its use in biotechnological applications aimed at environmental cleanup. This adaptability highlights the importance of Pseudomonas putida DPA1 in maintaining ecosystem health and its potential for innovative applications in waste management and environmental restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. DPA1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida str. DPA1

Accession NumberNNBI00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5630 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative hth-type transcriptional regulator yjirCBL13_05409Not Available-5966424 - 596784851927.4
hypothetical proteinCBL13_05410Not Available+5968007 - 596879227709.9
nadp-dependent 3-hydroxy acid dehydrogenase ydfgCBL13_05411Not Available+5968814 - 596957526940.5
formate dehydrogenase-o major subunit precursorCBL13_05412Not Available+5969723 - 597031321428.6
formate dehydrogenase-o major subunit precursorCBL13_05414Not Available+5970362 - 597279190431.1
formate dehydrogenase-o iron-sulfur subunitCBL13_05415Not Available+5972791 - 597374134555.1
formate dehydrogenase, cytochrome b556(fdo) subunitCBL13_05416Not Available+5973738 - 597439425013.0
protein fdheCBL13_05417Not Available+5974399 - 597532533071.9
l-seryl-trna(sec) selenium transferaseCBL13_05418Not Available+5975470 - 597689751851.0
selenocysteine-specific elongation factorCBL13_05419Not Available+5976894 - 597881670116.7

Displaying genes 5321 – 5330 of 5741 in total

Pathways

24 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites