Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. DPA1
Accession NumberNNBI00000000.1
Gene Summary
Adenine Count
1216865 bp
Thymine Count
1193652 bp
Guanine Count
1906742 bp
Cytosine Count
1950079 bp
Genome Length
6393883 bp
Protein-coding Genes
5630 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxy-terminal processing protease ctpb precursor | CBL13_04525 | Not Available | + | 4990460 - 4991776 | 46336.4 |
| divergent polysaccharide deacetylase | CBL13_04526 | Not Available | + | 4991785 - 4992552 | 27812.9 |
| hypothetical protein | CBL13_04527 | Not Available | - | 4992592 - 4997277 | 173885.0 |
| high-affinity choline transport protein | CBL13_04528 | Not Available | - | 4997395 - 4999398 | 73548.0 |
| hth-type transcriptional regulator beti | CBL13_04529 | Not Available | + | 4999874 - 5000530 | 24047.1 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | CBL13_04530 | Not Available | + | 5000570 - 5002042 | 52989.1 |
| oxygen-dependent choline dehydrogenase | CBL13_04531 | Not Available | + | 5002120 - 5003817 | 62566.4 |
| hypothetical protein | CBL13_04532 | Not Available | - | 5003860 - 5006010 | 79008.1 |
| k(+)/h(+) antiporter nhap2 | CBL13_04533 | Not Available | + | 5006188 - 5007930 | 61265.8 |
| mechanosensitive channel msck precursor | CBL13_04534 | Not Available | + | 5007966 - 5011274 | 122419.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



