Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. DPA1
Accession NumberNNBI00000000.1
Gene Summary
Adenine Count
1216865 bp
Thymine Count
1193652 bp
Guanine Count
1906742 bp
Cytosine Count
1950079 bp
Genome Length
6393883 bp
Protein-coding Genes
5630 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein yhby | CBL13_04127 | Not Available | + | 4536638 - 4536946 | 11612.1 |
| hypothetical protein | CBL13_04128 | Not Available | - | 4536959 - 4537408 | 16475.6 |
| transcription elongation factor grea | CBL13_04129 | Not Available | - | 4537386 - 4537868 | 17575.8 |
| carbamoyl-phosphate synthase large chain | CBL13_04130 | Not Available | - | 4537865 - 4541086 | 117417.0 |
| carbamoyl-phosphate synthase small chain | CBL13_04131 | Not Available | - | 4541192 - 4542328 | 40603.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CBL13_04133 | Not Available | - | 4542594 - 4543397 | 28425.3 |
| chaperone protein dnaj | CBL13_04134 | Not Available | - | 4543411 - 4544535 | 40126.1 |
| chaperone protein dnak | CBL13_04135 | Not Available | - | 4544734 - 4546659 | 68774.6 |
| protein grpe | CBL13_04136 | Not Available | - | 4546761 - 4547318 | 20502.2 |
| dna repair protein recn | CBL13_04137 | Not Available | + | 4547511 - 4549184 | 60903.6 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



