Pseudomonas putida str. DPA1

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DPA1 is a Gram-negative, rod-shaped bacterium that exists primarily as single cells and is characterized by its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. As a heterotroph, P. putida DPA1 utilizes organic compounds as its energy source, making it well-suited for nutrient-rich habitats such as soil and wastewater. This strain does not undergo sporulation, which may indicate a reliance on stable environmental conditions for survival and growth. The ecological role of Pseudomonas putida DPA1 in soil and wastewater environments is significant, as it contributes to the degradation of organic pollutants, thereby aiding in bioremediation processes. Its metabolic versatility allows it to adapt to varying nutrient availability and oxygen levels, potentially facilitating its use in biotechnological applications aimed at environmental cleanup. This adaptability highlights the importance of Pseudomonas putida DPA1 in maintaining ecosystem health and its potential for innovative applications in waste management and environmental restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. DPA1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida str. DPA1

Accession NumberNNBI00000000.1

Gene Summary

Adenine Count

1216865 bp

Thymine Count

1193652 bp

Guanine Count

1906742 bp

Cytosine Count

1950079 bp

Genome Length

6393883 bp

Protein-coding Genes

5630 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
xylose isomerase-like tim barrelCBL13_01287Not Available-1436609 - 143738828059.9
hth-type transcriptional regulator kdgrCBL13_01288Not Available-1437453 - 143847236790.2
gluconate 2-dehydrogenase cytochrome c subunit precursorCBL13_01289Not Available-1438717 - 143996444146.0
gluconate 2-dehydrogenase flavoprotein precursorCBL13_01290Not Available-1439977 - 144176165178.2
gluconate 2-dehydrogenase subunit 3 precursorCBL13_01291Not Available-1441765 - 144251126930.9
lipopolysaccharide core heptose(ii)-phosphate phosphatase precursorCBL13_01292Not Available+1442790 - 144347924821.5
pap2 superfamily proteinCBL13_01293Not Available+1443482 - 144430331055.0
hypothetical proteinCBL13_01294Not Available+1444536 - 144538432278.8
phage-related baseplate assembly proteinCBL13_01295Not Available+1445398 - 144757581986.3
hypothetical proteinCBL13_01296Not Available+1447575 - 144845332281.4

Displaying genes 1341 – 1350 of 5741 in total

Pathways

24 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites