Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida
Accession NumberNBWB00000000.1
Gene Summary
Adenine Count
1274015 bp
Thymine Count
1282611 bp
Guanine Count
2064459 bp
Cytosine Count
2062822 bp
Genome Length
6684468 bp
Protein-coding Genes
6009 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI560_04360 | Not Available | + | 1003064 - 1003444 | 10823.0 |
| duf2946 domain-containing protein | DI560_04365 | Not Available | + | 1003549 - 1003959 | 14494.5 |
| tonb-dependent siderophore receptor | DI560_04370 | Not Available | + | 1004026 - 1006173 | 79328.3 |
| sam-dependent methyltransferase | DI560_04375 | Not Available | - | 1006255 - 1006983 | 27261.5 |
| mfs transporter | DI560_04380 | Not Available | + | 1007220 - 1008557 | 47007.7 |
| cusa/czca family heavy metal efflux rnd transporter | DI560_04385 | Not Available | - | 1008594 - 1011740 | 112783.0 |
| efflux rnd transporter periplasmic adaptor subunit | DI560_04390 | Not Available | - | 1011757 - 1012950 | 42036.4 |
| tolc family protein | DI560_04395 | Not Available | - | 1012947 - 1014197 | 44671.9 |
| type ii 3-dehydroquinate dehydratase | DI560_04400 | Not Available | + | 1014435 - 1014884 | 16439.8 |
| shikimate dehydrogenase | DI560_04405 | Not Available | + | 1014881 - 1015729 | 29988.3 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



