Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida
Accession NumberNBWB00000000.1
Gene Summary
Adenine Count
1274015 bp
Thymine Count
1282611 bp
Guanine Count
2064459 bp
Cytosine Count
2062822 bp
Genome Length
6684468 bp
Protein-coding Genes
6009 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | DI560_03480 | Not Available | - | 801191 - 801751 | 20163.2 |
| hypothetical protein | DI560_03485 | Not Available | + | 801909 - 802127 | 7908.4 |
| lysine decarboxylase | DI560_03490 | Not Available | - | 802111 - 804360 | 81988.5 |
| dna polymerase iii subunit epsilon | DI560_03495 | Not Available | - | 804434 - 805192 | 27218.1 |
| ribonuclease hi | DI560_03500 | Not Available | - | 805264 - 805710 | 16959.3 |
| sam-dependent methyltransferase | DI560_03505 | Not Available | - | 805723 - 806496 | 28483.4 |
| hydroxyacylglutathione hydrolase | DI560_03510 | Not Available | + | 806582 - 807361 | 28664.0 |
| lysm peptidoglycan-binding domain-containing protein | DI560_03515 | Not Available | + | 807462 - 808892 | 52902.2 |
| abc transporter substrate-binding protein | DI560_03520 | Not Available | + | 809070 - 810842 | 67768.5 |
| hypothetical protein | DI560_03525 | Not Available | + | 810839 - 812674 | 69530.6 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



