Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida
Accession NumberNBWB00000000.1
Gene Summary
Adenine Count
1274015 bp
Thymine Count
1282611 bp
Guanine Count
2064459 bp
Cytosine Count
2062822 bp
Genome Length
6684468 bp
Protein-coding Genes
6009 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | DI560_02820 | Not Available | - | 662373 - 662687 | 12079.4 |
| flavodoxin family protein | DI560_02825 | Not Available | + | 662850 - 663440 | 21713.7 |
| lysr family transcriptional regulator | DI560_02830 | Not Available | + | 663532 - 664428 | 33635.4 |
| gamma-glutamyltransferase | DI560_02835 | Not Available | + | 664546 - 666213 | 59684.3 |
| methyl-accepting chemotaxis protein | DI560_02840 | Not Available | - | 666450 - 668369 | 68803.5 |
| neutral zinc metallopeptidase | DI560_02845 | Not Available | - | 668562 - 669446 | 31580.1 |
| protocatechuate 3,4-dioxygenase subunit beta | DI560_02850 | Not Available | + | 669635 - 670354 | 26795.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | DI560_02855 | Not Available | + | 670366 - 670971 | 22406.3 |
| trna (uridine(54)-c5)-methyltransferase trma | DI560_02860 | Not Available | - | 671085 - 672170 | 40922.9 |
| ncs2 family permease | DI560_02865 | Not Available | - | 672167 - 673462 | 44763.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



