Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida
Accession NumberNBWB00000000.1
Gene Summary
Adenine Count
1274015 bp
Thymine Count
1282611 bp
Guanine Count
2064459 bp
Cytosine Count
2062822 bp
Genome Length
6684468 bp
Protein-coding Genes
6009 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-amp phosphodiesterase | DI560_05400 | Not Available | - | 1240504 - 1241322 | 30391.2 |
| duf1249 domain-containing protein | DI560_05405 | Not Available | - | 1241393 - 1241845 | 17237.0 |
| nudix domain-containing protein | DI560_05410 | Not Available | - | 1241836 - 1242453 | 23238.6 |
| duf3298 domain-containing protein | DI560_05415 | Not Available | + | 1242638 - 1243384 | 27761.4 |
| putative hydroxymethylpyrimidine transporter cytx | DI560_05420 | Not Available | - | 1243353 - 1244636 | 44710.7 |
| phosphomethylpyrimidine synthase thic | DI560_05425 | Not Available | - | 1244783 - 1246669 | 69725.0 |
| channel protein tolc | DI560_05430 | Not Available | + | 1247096 - 1248532 | 52715.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | DI560_05435 | Not Available | - | 1248604 - 1249875 | 46315.7 |
| lysr family transcriptional regulator | DI560_05440 | Not Available | - | 1249887 - 1250777 | 33625.4 |
| qace family quaternary ammonium compound efflux smr transporter | DI560_05445 | Not Available | + | 1250865 - 1251197 | 11486.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



