Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida
Accession NumberNBWB00000000.1
Gene Summary
Adenine Count
1274015 bp
Thymine Count
1282611 bp
Guanine Count
2064459 bp
Cytosine Count
2062822 bp
Genome Length
6684468 bp
Protein-coding Genes
6009 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI560_04830 | Not Available | - | 1103349 - 1104884 | 57017.3 |
| atp-dependent zinc protease | DI560_04835 | Not Available | - | 1104890 - 1105426 | 19426.5 |
| gntr family transcriptional regulator | DI560_04840 | Not Available | + | 1105720 - 1106436 | 27036.2 |
| methylisocitrate lyase | DI560_04845 | Not Available | + | 1106433 - 1107323 | 31811.2 |
| 2-methylcitrate synthase | DI560_04850 | Not Available | + | 1107427 - 1108554 | 41857.3 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | DI560_04855 | Not Available | + | 1108707 - 1111295 | 94198.8 |
| 2-methylaconitate cis-trans isomerase prpf | DI560_04860 | Not Available | + | 1111357 - 1112547 | 41553.5 |
| 2-methylcitrate dehydratase | DI560_04865 | Not Available | + | 1112615 - 1114099 | 55036.1 |
| duf1289 domain-containing protein | DI560_04875 | Not Available | + | 1117159 - 1117626 | 18322.2 |
| hypothetical protein | DI560_04880 | Not Available | + | 1117701 - 1118345 | 24649.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



