Pseudomonas putida str. JBC17

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain JBC17 is a Gram-negative, rod-shaped bacterium that exists as single cells and is characterized as a nonsporulating, heterotrophic organism. This strain is facultatively anaerobic, allowing it to thrive in various environmental conditions, including the presence and absence of oxygen. P. putida JBC17 is commonly found in soil and wastewater habitats, reflecting its adaptability to nutrient-rich environments often impacted by organic waste. As a heterotroph, P. putida JBC17 utilizes organic compounds as its energy source, which enables it to play a significant role in the biogeochemical cycling of nutrients in its natural habitats. The ability to survive and flourish in both aerobic and anaerobic conditions suggests that this strain may possess metabolic versatility, allowing it to exploit a wide range of substrates in diverse ecological niches. The ecological significance of Pseudomonas putida JBC17 is underscored by its potential involvement in bioremediation processes, particularly in environments contaminated with organic pollutants. By degrading complex organic compounds, this strain contributes to soil health and wastewater treatment, highlighting its importance in environmental microbiology and sustainable practices. Further exploration of its metabolic pathways could provide insights into its functional roles in ecosystems affected by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. JBC17
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida str. JBC17

Accession NumberNZ_CP029693.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
formate-dependent phosphoribosylglycinamide formyltransferaseDKY63_RS24885Not Available+5314676 - 531585742331.9
sugar abc transporter atpaseDKY63_RS24895Not Available+5316036 - 531658420419.3
imp dehydrogenaseDKY63_RS24900Not Available+5316813 - 531828251876.7
glutamine-hydrolyzing gmp synthaseDKY63_RS24905Not Available+5318381 - 531995858174.1
membrane-targeted effector domain-containing toxinDKY63_RS24910Not Available-5320040 - 5323309120518.0
multicopper oxidase family proteinDKY63_RS24915Not Available+5323308 - 532468450567.6
trna adenosine(34) deaminase tadaDKY63_RS24920Not Available+5324684 - 532518117616.3
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobDKY63_RS24925Not Available-5325307 - 532626336282.5
carboxy-s-adenosyl-l-methionine synthase cmoaDKY63_RS24930Not Available-5326260 - 532700327561.2
lysoplasmalogenaseDKY63_RS24935Not Available-5327193 - 532782822586.7

Displaying genes 5001 – 5010 of 6271 in total

Pathways

24 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites