Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS25805 | Not Available | + | 5537032 - 5538212 | 41188.2 |
| mfs transporter | E6B08_RS25810 | Not Available | + | 5538261 - 5539649 | 48794.9 |
| ilvd/edd family dehydratase | E6B08_RS25815 | Not Available | + | 5539681 - 5541468 | 64024.1 |
| hypothetical protein | E6B08_RS25820 | Not Available | + | 5541726 - 5542772 | 37039.9 |
| trypsin-like peptidase domain-containing protein | E6B08_RS25825 | Not Available | + | 5542983 - 5543630 | 23442.4 |
| diguanylate cyclase | E6B08_RS25830 | Not Available | - | 5543634 - 5544698 | 39092.9 |
| addiction module antidote protein | E6B08_RS25835 | Not Available | - | 5544871 - 5545167 | 10501.7 |
| type ii toxin-antitoxin system rele/pare family toxin | E6B08_RS25840 | Not Available | - | 5545164 - 5545460 | 10982.4 |
| bestrophin family protein | E6B08_RS25845 | Not Available | + | 5545679 - 5546569 | 33462.8 |
| phosphonate abc transporter, permease protein phne | E6B08_RS25850 | Not Available | - | 5546584 - 5547351 | 26784.3 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



