Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic/alkene monooxygenase hydroxylase subunit beta | E6B08_RS25105 | Not Available | - | 5389389 - 5390384 | 37314.6 |
| phenol hydroxylase subunit | E6B08_RS25110 | Not Available | - | 5390440 - 5390697 | 9672.31 |
| hypothetical protein | E6B08_RS30905 | Not Available | + | 5390781 - 5390927 | 5716.82 |
| sigma-54-dependent fis family transcriptional regulator | E6B08_RS25115 | Not Available | + | 5391075 - 5392778 | 63353.3 |
| catechol 1,2-dioxygenase | E6B08_RS25120 | Not Available | + | 5392939 - 5393856 | 33367.1 |
| glycine cleavage system protein gcvh | E6B08_RS25125 | Not Available | + | 5394185 - 5394568 | 13804.9 |
| aminomethyl-transferring glycine dehydrogenase | E6B08_RS25130 | Not Available | + | 5394581 - 5397436 | 102409.0 |
| l-serine ammonia-lyase | E6B08_RS25135 | Not Available | + | 5397571 - 5398947 | 48872.0 |
| glycine cleavage system aminomethyltransferase gcvt | E6B08_RS25140 | Not Available | + | 5398975 - 5400096 | 40308.0 |
| cold-shock protein | E6B08_RS25145 | Not Available | + | 5400442 - 5400654 | 7766.14 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



