Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | E6B08_RS25055 | Not Available | + | 5378933 - 5379943 | 37991.5 |
| carbamate kinase | E6B08_RS25060 | Not Available | + | 5380120 - 5381049 | 33332.2 |
| duf5064 family protein | E6B08_RS25065 | Not Available | + | 5381104 - 5381478 | 14226.9 |
| sigma-54-dependent transcriptional regulator | E6B08_RS25070 | Not Available | + | 5381610 - 5383118 | 54335.7 |
| na/pi cotransporter family protein | E6B08_RS25075 | Not Available | - | 5383126 - 5384964 | 66467.4 |
| transporter | E6B08_RS25080 | Not Available | - | 5385106 - 5386005 | 33100.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | E6B08_RS25085 | Not Available | - | 5386085 - 5387146 | 38591.0 |
| phenol hydroxylase subunit p4 | E6B08_RS25090 | Not Available | - | 5387159 - 5387518 | 12839.4 |
| aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | E6B08_RS25095 | Not Available | - | 5387576 - 5389090 | 59211.6 |
| mmob/dmpm family protein | E6B08_RS25100 | Not Available | - | 5389123 - 5389392 | 10250.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



