Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | E6B08_RS23905 | Not Available | - | 5132440 - 5133186 | 26820.2 |
| aspartate--trna ligase | E6B08_RS23910 | Not Available | - | 5133298 - 5135073 | 66413.8 |
| fmdb family zinc ribbon protein | E6B08_RS23915 | Not Available | - | 5135169 - 5135390 | 7907.47 |
| ribbon-helix-helix domain-containing protein | E6B08_RS23920 | Not Available | - | 5135483 - 5135809 | 12357.0 |
| dps family protein | E6B08_RS23925 | Not Available | - | 5135960 - 5136433 | 17718.2 |
| cold-shock protein | E6B08_RS31395 | Not Available | + | 5136713 - 5137306 | 21359.4 |
| slyx family protein | E6B08_RS23935 | Not Available | - | 5137361 - 5137570 | 7904.32 |
| hit domain-containing protein | E6B08_RS23940 | Not Available | - | 5137572 - 5137991 | 15869.9 |
| oprd family porin | E6B08_RS23945 | Not Available | + | 5138718 - 5140016 | 47423.8 |
| proline--trna ligase | E6B08_RS23950 | Not Available | + | 5140179 - 5141894 | 63642.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



