Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | E6B08_RS23655 | Not Available | + | 5091301 - 5091996 | 24747.9 |
| tigr03759 family integrating conjugative element protein | E6B08_RS23660 | Not Available | + | 5092007 - 5092765 | 27633.8 |
| lytic transglycosylase domain-containing protein | E6B08_RS23665 | Not Available | + | 5092750 - 5093310 | 20148.3 |
| integrating conjugative element protein | E6B08_RS23670 | Not Available | + | 5093307 - 5093837 | 18566.1 |
| hypothetical protein | E6B08_RS23675 | Not Available | + | 5093846 - 5094091 | 9328.2 |
| type iv conjugative transfer system coupling protein trad | E6B08_RS23680 | Not Available | + | 5094093 - 5096309 | 82649.5 |
| tigr03747 family integrating conjugative element membrane protein | E6B08_RS23685 | Not Available | + | 5096320 - 5097069 | 27945.6 |
| uvrd-helicase domain-containing protein | E6B08_RS23690 | Not Available | + | 5097081 - 5098550 | 55932.3 |
| hypothetical protein | E6B08_RS23695 | Not Available | + | 5098569 - 5098880 | 11711.0 |
| lysr substrate-binding domain-containing protein | E6B08_RS23700 | Not Available | - | 5098999 - 5099886 | 33633.4 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



