Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gspe/pule family protein | E6B08_RS23240 | Not Available | + | 5013096 - 5014643 | 56850.3 |
| type ii secretion system f family protein | E6B08_RS23245 | Not Available | + | 5014636 - 5015796 | 43153.1 |
| type 4 pilus major pilin | E6B08_RS23250 | Not Available | + | 5015868 - 5016347 | 16116.2 |
| atpase, t2ss/t4p/t4ss family | E6B08_RS23255 | Not Available | + | 5016358 - 5017302 | 33984.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | E6B08_RS23260 | Not Available | + | 5017292 - 5018506 | 42596.3 |
| is5 family transposase | E6B08_RS23265 | Not Available | + | 5018559 - 5019539 | 36955.9 |
| tyrosine-type recombinase/integrase | E6B08_RS23270 | Not Available | - | 5020760 - 5021923 | 43999.6 |
| helix-turn-helix domain-containing protein | E6B08_RS23275 | Not Available | - | 5021898 - 5022128 | 8623.35 |
| type iv pilus biogenesis protein pilm | E6B08_RS23280 | Not Available | + | 5022281 - 5022721 | 15296.2 |
| hypothetical protein | E6B08_RS23290 | Not Available | + | 5023621 - 5023989 | 13429.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



