Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deaminase domain-containing protein | E6B08_RS22170 | Not Available | + | 4785891 - 4790078 | 155042.0 |
| mfs transporter | E6B08_RS22175 | Not Available | + | 4790171 - 4791367 | 41018.3 |
| fad-binding and (fe-s)-binding domain-containing protein | E6B08_RS22180 | Not Available | - | 4791506 - 4794529 | 111080.0 |
| lysr substrate-binding domain-containing protein | E6B08_RS22185 | Not Available | + | 4794682 - 4795566 | 32604.2 |
| amino acid permease | E6B08_RS22190 | Not Available | - | 4795655 - 4797061 | 50544.0 |
| 23s rrna pseudouridine(2605) synthase rlub | E6B08_RS22200 | Not Available | - | 4797885 - 4798949 | 39993.0 |
| smc-scp complex subunit scpb | E6B08_RS22205 | Not Available | - | 4799204 - 4799980 | 29321.8 |
| segregation and condensation protein a | E6B08_RS22210 | Not Available | - | 4799967 - 4800692 | 27545.7 |
| l-threonylcarbamoyladenylate synthase | E6B08_RS22215 | Not Available | - | 4800818 - 4801447 | 23411.6 |
| php domain-containing protein | E6B08_RS22220 | Not Available | - | 4801461 - 4802321 | 31256.2 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



