Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | E6B08_RS21170 | Not Available | - | 4582731 - 4583531 | 29757.5 |
| exonuclease domain-containing protein | E6B08_RS21175 | Not Available | + | 4583693 - 4584253 | 21299.3 |
| pyrimidine/purine nucleoside phosphorylase | E6B08_RS21180 | Not Available | + | 4584327 - 4584611 | 10262.1 |
| alpha/beta family hydrolase | E6B08_RS21185 | Not Available | - | 4584714 - 4585406 | 24694.8 |
| cytochrome-c oxidase, cbb3-type subunit i | E6B08_RS21190 | Not Available | + | 4585459 - 4586883 | 52771.9 |
| cytochrome-c oxidase, cbb3-type subunit ii | E6B08_RS21195 | Not Available | + | 4586897 - 4587505 | 22706.3 |
| cbb3-type cytochrome oxidase subunit 3 | E6B08_RS21200 | Not Available | + | 4587511 - 4587702 | 7253.0 |
| cytochrome-c oxidase, cbb3-type subunit iii | E6B08_RS21205 | Not Available | + | 4587699 - 4588628 | 33665.8 |
| cytochrome-c oxidase, cbb3-type subunit i | E6B08_RS21210 | Not Available | + | 4588899 - 4590341 | 53618.2 |
| cytochrome-c oxidase, cbb3-type subunit ii | E6B08_RS21215 | Not Available | + | 4590341 - 4590949 | 22708.4 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



