Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| start domain-containing protein | E6B08_RS21065 | Not Available | - | 4562985 - 4563590 | 22304.8 |
| ykgj family cysteine cluster protein | E6B08_RS21070 | Not Available | - | 4563623 - 4563877 | 8840.8 |
| hypothetical protein | E6B08_RS21075 | Not Available | - | 4564010 - 4564489 | 17180.3 |
| plp-dependent aminotransferase family protein | E6B08_RS21080 | Not Available | - | 4564552 - 4565994 | 53694.9 |
| ompa family protein | E6B08_RS21085 | Not Available | - | 4566190 - 4567002 | 29911.6 |
| duf4398 domain-containing protein | E6B08_RS21090 | Not Available | - | 4566999 - 4567352 | 13011.6 |
| substrate-binding periplasmic protein | E6B08_RS21095 | Not Available | - | 4567362 - 4568183 | 29913.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | E6B08_RS21100 | Not Available | - | 4568357 - 4569286 | 31241.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | E6B08_RS21105 | Not Available | - | 4569287 - 4570036 | 26394.2 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | E6B08_RS21110 | Not Available | + | 4570588 - 4572270 | 61150.7 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



