Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E6B08_RS20245 | Not Available | - | 4386239 - 4386424 | 7165.75 |
| hypothetical protein | E6B08_RS20250 | Not Available | - | 4386425 - 4387591 | 43619.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS20260 | Not Available | + | 4388669 - 4388900 | 8450.19 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS20265 | Not Available | + | 4388977 - 4389131 | 5607.78 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS20270 | Not Available | - | 4389133 - 4389318 | 7414.98 |
| integrase core domain-containing protein | E6B08_RS20275 | Not Available | + | 4390023 - 4391201 | 45021.2 |
| is21 family transposase | E6B08_RS20280 | Not Available | + | 4391565 - 4393079 | 57392.7 |
| is21-like element helper atpase istb | E6B08_RS20285 | Not Available | + | 4393100 - 4393855 | 28136.1 |
| tyrosine-type recombinase/integrase | E6B08_RS20295 | Not Available | - | 4394041 - 4395837 | 68154.5 |
| Trna-gly | Not Available | Not Available | + | 4396059 - 4396134 | Not Available |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



