Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alginate export family protein | E6B08_RS20195 | Not Available | - | 4374923 - 4376338 | 52759.9 |
| pdr/vanb family oxidoreductase | E6B08_RS20200 | Not Available | - | 4376401 - 4377345 | 34229.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | E6B08_RS20205 | Not Available | - | 4377361 - 4378458 | 41320.2 |
| 4-oxalomesaconate tautomerase | E6B08_RS20210 | Not Available | - | 4378733 - 4379797 | 36810.3 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | E6B08_RS20215 | Not Available | - | 4379799 - 4380515 | 25291.4 |
| 4-oxalmesaconate hydratase | E6B08_RS20220 | Not Available | - | 4380537 - 4381274 | 27555.7 |
| gallate dioxygenase | E6B08_RS20225 | Not Available | - | 4381296 - 4382558 | 46982.3 |
| lysr family transcriptional regulator | E6B08_RS20230 | Not Available | - | 4382681 - 4383883 | 43413.4 |
| hypothetical protein | E6B08_RS20235 | Not Available | + | 4384777 - 4385100 | 12225.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS20240 | Not Available | + | 4385112 - 4385949 | 30730.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



