Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6379 domain-containing protein | E6B08_RS20100 | Not Available | - | 4350619 - 4351077 | 17091.5 |
| sugar phosphate isomerase/epimerase family protein | E6B08_RS20105 | Not Available | - | 4351098 - 4352033 | 36167.0 |
| mfs transporter | E6B08_RS20110 | Not Available | - | 4352071 - 4353429 | 47752.2 |
| gmc oxidoreductase | E6B08_RS20115 | Not Available | - | 4353501 - 4355174 | 61764.9 |
| multidrug effflux mfs transporter | E6B08_RS20120 | Not Available | + | 4355806 - 4357023 | 43221.1 |
| prc-barrel domain-containing protein | E6B08_RS20125 | Not Available | + | 4357577 - 4358011 | 16151.9 |
| hypothetical protein | E6B08_RS20130 | Not Available | - | 4358165 - 4358371 | 7744.37 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS30880 | Not Available | - | 4358378 - 4358563 | 6790.42 |
| mobh family relaxase | E6B08_RS20135 | Not Available | + | 4358785 - 4360530 | 65191.3 |
| formaldehyde dehydrogenase, glutathione-independent | E6B08_RS20140 | Not Available | - | 4360908 - 4362104 | 42232.7 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



