Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr03747 family integrating conjugative element membrane protein | E6B08_RS19900 | Not Available | + | 4309285 - 4310013 | 27402.0 |
| hypothetical protein | E6B08_RS31205 | Not Available | - | 4310171 - 4310386 | 8089.62 |
| aaa family atpase | E6B08_RS19905 | Not Available | - | 4310498 - 4311895 | 52261.6 |
| aaa family atpase | E6B08_RS31345 | Not Available | - | 4311861 - 4312436 | 21347.4 |
| helix-turn-helix domain-containing protein | E6B08_RS19910 | Not Available | + | 4312726 - 4313145 | 15255.2 |
| raqprd family integrative conjugative element protein | E6B08_RS19915 | Not Available | + | 4313356 - 4313691 | 12487.5 |
| tigr03758 family integrating conjugative element protein | E6B08_RS19920 | Not Available | + | 4313678 - 4313917 | 8501.56 |
| tigr03745 family integrating conjugative element membrane protein | E6B08_RS19925 | Not Available | + | 4313933 - 4314310 | 13368.8 |
| tigr03750 family conjugal transfer protein | E6B08_RS19930 | Not Available | + | 4314318 - 4314719 | 14680.3 |
| pfl_4703 family integrating conjugative element protein | E6B08_RS19935 | Not Available | + | 4314716 - 4315354 | 24335.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



