Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | E6B08_RS19605 | Not Available | - | 4252902 - 4253750 | 30443.9 |
| lysr family transcriptional regulator | E6B08_RS30965 | Not Available | + | 4254296 - 4254448 | 5512.76 |
| lysr family transcriptional regulator | E6B08_RS19610 | Not Available | + | 4254458 - 4255216 | 28206.6 |
| mfs transporter | E6B08_RS19615 | Not Available | + | 4255511 - 4256812 | 45991.5 |
| m20 aminoacylase family protein | E6B08_RS19620 | Not Available | + | 4256844 - 4258025 | 41953.2 |
| oprd family outer membrane porin | E6B08_RS19625 | Not Available | + | 4258143 - 4259483 | 49505.8 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS19630 | Not Available | + | 4259528 - 4260272 | 24601.1 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS19635 | Not Available | + | 4260287 - 4260965 | 24284.0 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS19640 | Not Available | + | 4261186 - 4262175 | 37733.8 |
| hypothetical protein | E6B08_RS30875 | Not Available | - | 4262186 - 4262521 | 12420.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



