Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | E6B08_RS11080 | Not Available | - | 2405833 - 2406849 | 38152.7 |
| type vi secretion system baseplate subunit tssf | E6B08_RS11085 | Not Available | - | 2406813 - 2408579 | 66140.6 |
| type vi secretion system baseplate subunit tsse | E6B08_RS11090 | Not Available | - | 2408582 - 2408992 | 15479.5 |
| type vi secretion system contractile sheath large subunit | E6B08_RS11095 | Not Available | - | 2408989 - 2410479 | 55839.3 |
| type vi secretion system contractile sheath small subunit | E6B08_RS11100 | Not Available | - | 2410498 - 2411001 | 18547.4 |
| type vi secretion system-associated protein vasi | E6B08_RS11105 | Not Available | + | 2411357 - 2411974 | 22397.8 |
| type vi secretion system protein tssa | E6B08_RS11110 | Not Available | + | 2411962 - 2413410 | 53618.2 |
| type vi secretion system membrane subunit tssm | E6B08_RS11115 | Not Available | + | 2413419 - 2416979 | 132967.0 |
| cap domain-containing protein | E6B08_RS11120 | Not Available | - | 2417031 - 2417879 | 30494.3 |
| lysr family transcriptional regulator | E6B08_RS11125 | Not Available | - | 2417970 - 2418872 | 33598.9 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



