Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | E6B08_RS10490 | Not Available | + | 2274657 - 2275589 | 35428.2 |
| homoprotocatechuate degradation operon regulator hpar | E6B08_RS10495 | Not Available | + | 2275759 - 2276181 | 16132.7 |
| bcr/cfla family multidrug efflux mfs transporter | E6B08_RS10500 | Not Available | + | 2276313 - 2277488 | 40224.7 |
| hypothetical protein | E6B08_RS10505 | Not Available | - | 2277619 - 2277846 | 8553.06 |
| hypothetical protein | E6B08_RS10510 | Not Available | + | 2278432 - 2278635 | 6691.25 |
| lysr substrate-binding domain-containing protein | E6B08_RS31305 | Not Available | - | 2278643 - 2278966 | 11122.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS31090 | Not Available | + | 2278905 - 2279231 | 11288.0 |
| nad(p)-dependent alcohol dehydrogenase | E6B08_RS10525 | Not Available | + | 2279458 - 2280552 | 38360.2 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS10530 | Not Available | + | 2280601 - 2282078 | 50143.2 |
| lysr family transcriptional regulator | E6B08_RS10535 | Not Available | - | 2282080 - 2282982 | 33175.6 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



