Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | E6B08_RS10195 | Not Available | + | 2210968 - 2211321 | 12717.2 |
| integrase core domain-containing protein | E6B08_RS10200 | Not Available | - | 2212141 - 2213319 | 45002.2 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS10205 | Not Available | - | 2213635 - 2215451 | 66528.3 |
| cerr family c-terminal domain-containing protein | E6B08_RS10210 | Not Available | - | 2215580 - 2216290 | 26557.9 |
| hlyd family secretion protein | E6B08_RS10215 | Not Available | + | 2216393 - 2217301 | 32177.2 |
| hypothetical protein | E6B08_RS31080 | Not Available | + | 2217268 - 2217516 | 8458.21 |
| dha2 family efflux mfs transporter permease subunit | E6B08_RS10220 | Not Available | + | 2217509 - 2219089 | 56226.8 |
| efflux transporter outer membrane subunit | E6B08_RS10225 | Not Available | + | 2219086 - 2220510 | 50663.8 |
| abc transporter substrate-binding protein | E6B08_RS10230 | Not Available | - | 2220638 - 2221675 | 37692.7 |
| phenylacetic acid degradation bifunctional protein paaz | E6B08_RS10235 | Not Available | - | 2221904 - 2223955 | 72805.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



